# HG changeset patch # User rv43 # Date 1650380352 0 # Node ID afb612b64f265bef2ccfb86c2470e37f712ca8be # Parent b1f92b63f84c8203a3772279782a2c3a6a8dd780 "planemo upload for repository https://github.com/rolfverberg/galaxytools commit c566c32f7c1506ab271ae08eb14a2982ee511938" diff -r b1f92b63f84c -r afb612b64f26 tomo.py --- a/tomo.py Tue Apr 19 14:44:53 2022 +0000 +++ b/tomo.py Tue Apr 19 14:59:12 2022 +0000 @@ -1459,7 +1459,7 @@ """ if num_core is None: num_core = self.num_core - logging.info(f'num_core = {self.num_core}') + logging.info(f'num_core = {num_core}') # Try loading any already preprocessed stacks (skip in Galaxy) # preprocessed stack order for each one in stack: row,theta,column stack_info = self.config['stack_info'] @@ -1543,8 +1543,7 @@ """ if num_core is None: num_core = self.num_core - num_core = 1 - logging.info(f'num_core = {self.num_core}') + logging.info(f'num_core = {num_core}') logging.debug('Find centers for tomography stacks') stacks = self.config['stack_info']['stacks'] available_stacks = [stack['index'] for stack in stacks if stack.get('preprocessed', False)] @@ -1896,7 +1895,7 @@ """ if num_core is None: num_core = self.num_core - logging.info(f'num_core = {self.num_core}') + logging.info(f'num_core = {num_core}') if self.galaxy_flag: assert(galaxy_param) if not os.path.exists('center_slice_pngs'):