--- a/tomo_reduce.xml	Mon Mar 20 17:30:24 2023 +0000
+++ b/tomo_reduce.xml	Tue Mar 21 17:40:03 2023 +0000
@@ -1,24 +1,34 @@
-<tool id="tomo_reduce" name="Tomo Reduce" version="0.1.1" python_template_version="3.9">
+<tool id="tomo_reduce" name="Tomo Reduce" version="0.1.0" python_template_version="3.9">
     <description>Reduce tomography images</description>
+    <macros>
+        <import>tomo_macros.xml</import>
+    </macros>
+    <expand macro="requirements" />
     <command detect_errors="exit_code">
         <![CDATA[
+            mkdir tomo_reduce_plots;
             $__tool_directory__/tomo_reduce.py
+            --input_file '$input_file'
+            --output_file 'output.nxs'
+            --galaxy_flag
+            --img_x_bounds $x_bounds.x_bound_low $x_bounds.x_bound_upp
             -l '$log'
         ]]>
     </command>
+    <inputs>
+        <param name="input_file" type="data" optional="false" label="Input file"/>
+    </inputs>
     <outputs>
-        <data name="log" format="txt" label="Log"/>
+        <expand macro="common_outputs"/>
+        <collection name="tomo_reduce_plots" type="list" label="Tomo data reduction images">
+            <discover_datasets pattern="__name_and_ext__" directory="tomo_reduce_plots"/>
+        </collection>
+        <data name="output_file" format="nxs" label="Reduced tomography data" from_work_dir="output.nxs"/>
     </outputs>
     <help>
         <![CDATA[
             Reduce tomography images.
         ]]>
     </help>
-    <citations>
-        <citation type="bibtex">
-@misc{tomo,
-  author = {Verberg, Rolf},
-  year = {2022}
-}</citation>
-    </citations>
+    <expand macro="citations"/>
 </tool>