Mercurial > repos > rv43 > chess_tomo
diff workflow/run_tomo.py @ 6:05335876d167 draft
planemo upload for repository https://github.com/rolfverberg/galaxytools commit f8c4bdb31c20c468045ad5e6eb255a293244bc6c-dirty
| author | rv43 |
|---|---|
| date | Mon, 20 Mar 2023 19:01:48 +0000 |
| parents | 543dba81eb15 |
| children | c99fc6a32869 |
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--- a/workflow/run_tomo.py Mon Mar 20 18:54:48 2023 +0000 +++ b/workflow/run_tomo.py Mon Mar 20 19:01:48 2023 +0000 @@ -874,11 +874,10 @@ # Select image bounds title = f'tomography image at theta={round(theta, 2)+0}' if img_x_bounds is not None: - if is_int_pair(img_x_bounds)i and img_x_bounds[0] == -1 and img_x_bounds[1] == -1 + if is_int_pair(img_x_bounds) and img_x_bounds[0] == -1 and img_x_bounds[1] == -1: img_x_bounds = None - elif not is_index_range(img_x_bounds, ge=0, - le=first_image.shape[0])): - raise ValueError(f'Invalid parameter img_x_bounds ({img_x_bounds})') + elif not is_index_range(img_x_bounds, ge=0, le=first_image.shape[0]): + raise ValueError(f'Invalid parameter img_x_bounds ({img_x_bounds})') if nxentry.instrument.source.attrs['station'] in ('id1a3', 'id3a'): pixel_size = nxentry.instrument.detector.x_pixel_size # Try to get a fit from the bright field
