Mercurial > repos > rnateam > vienna_rna

comparison rnalfold.xml @ 1:b82c46050674 draft

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Uploaded
author rnateam
date Wed, 04 Feb 2015 12:01:42 -0500
parents 031ad3250176
children 2c5a9f01ba08
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0:031ad3250176 1:b82c46050674
31 #end if 31 #end if
32 #end if 32 #end if
33 ]]> 33 ]]>
34 </command> 34 </command>
35 <inputs> 35 <inputs>
36 <param format="fasta" name="fasta_input" type="data" label="FASTA file"/> 36 <param format="fasta" name="fasta_input" type="data" label="FASTA file"/>
37 <param name="span" type="integer" min="0" max="5000" value="150" label="base pair span" help="Maximal distance between two paired bases. (-L)"/> 37 <param name="span" type="integer" min="0" max="5000" value="150" label="base pair span" help="Maximal distance between two paired bases. (-L)"/>
38 <param name="temperature" size="6" type="float" value="37.0" label="Temperature [°C]" help="-T"/> 38 <param name="temperature" size="6" type="float" value="37.0" label="Temperature [°C]" help="-T"/>
39 <param name="dangling" type="select" label="how to treat dangling end energies" help="-d"> 39 <param name="dangling" type="select" label="how to treat dangling end energies" help="-d">
40 <option value="2" selected="true">unpaired bases participate in all dangling ends (2)</option> 40 <option value="2" selected="true">unpaired bases participate in all dangling ends (2)</option>
41 <option value="0">ignore dangling ends (0)</option> 41 <option value="0">ignore dangling ends (0)</option>