Mercurial > repos > rnateam > sortmerna

view tool_dependencies.xml @ 1:dd73a3422870 draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/sortmerna commit 8f8692e83217a072a3ed928469621f1f606ab28a-dirty
author rnateam
date Tue, 04 Aug 2015 04:17:05 -0400
parents e18696d1bc0e
children
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<?xml version="1.0"?>
<tool_dependency>
    <package name="sortmerna" version="2.0">
        <install version="1.0">
            <actions>
                <action type="download_by_url" target_filename="sortmerna-2.0.tar.gz">https://github.com/biocore/sortmerna/archive/2.0.tar.gz</action>
                <action type="autoconf"/>
                <action type="set_environment">
                    <environment_variable name="SORTMERNADIR" action="set_to">$INSTALL_DIR</environment_variable>
                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
                </action>
            </actions>
        </install>
        <readme>
        SortMeRNA requires g++ 4.3 or later. Installation may take a moment since ribosomal databases have to be indexed.
        </readme>
    </package>
</tool_dependency>