Mercurial > repos > rnateam > sortmerna
diff tool_dependencies.xml @ 3:42509ccf8f59 draft
Uploaded
author | iuc |
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date | Tue, 04 Aug 2015 15:14:58 -0400 |
parents | |
children | 233da82dc31c |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Tue Aug 04 15:14:58 2015 -0400 @@ -0,0 +1,18 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="sortmerna" version="2.0"> + <install version="1.0"> + <actions> + <action type="download_by_url" target_filename="sortmerna-2.0.tar.gz">https://github.com/biocore/sortmerna/archive/2.0.tar.gz</action> + <action type="autoconf"/> + <action type="set_environment"> + <environment_variable name="SORTMERNADIR" action="set_to">$INSTALL_DIR</environment_variable> + <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> + </action> + </actions> + </install> + <readme> + SortMeRNA requires g++ 4.3 or later. Installation may take a moment since ribosomal databases have to be indexed. + </readme> + </package> +</tool_dependency>