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view test-data/coding.aln @ 1:0554fa091710 draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/rnacode commit b6d3800e260cdfcbe99e5f056344c3df101dad00
author rnateam
date Fri, 13 Apr 2018 07:37:15 -0400
parents 95340f016498
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CLUSTAL W(1.81) multiple sequence alignment


ec_K12.chr_fwd/3401506-3401703                     TGCAGGCGTTACTTTTAGAACAGCAGGACGGCAAAACTCTCGCATCAGTACA--GACTCT
ec_O157H7.chr_fwd/4138444-4138641                  TGCAGGCGTTACTTTTAGAACAGCAGGACGGCAAAACTCTCGCATCAGTACA--GACTCT
ec_APEC_O1.chr_fwd/3685781-3685978                 TGCAGGCGTTACTTTTAGAACAGCAGGACGGCAAAACTCTCGCATCAGTACA--GACTCT
ente638.chr_fwd/4000173-4000370                    TGCAGGCATTGATCTTAGAACAACAAGACGGCAAAACCCTGGCTTCGGTTCA--ATCCAT
shigFlex_2A.chr_fwd/3391056-3391253                TGCAGGCGTTACTTTTAGAACAGCAGGACGGCAAAACTCTCGCATCAGTACA--GACTCT
salmTyph.chr_fwd/3400613-3400810                   TGCAGGCGTTGATCTTAGAACAGCAGGACGGTAAAACCCTCGCATCCGTGCA--ACATCT
salmEnte_PARATYPI_ATC.chr_fwd/3353535-3353732      TGCAGGCGTTGATCTTAGAACAGCAGGACGGTAAAACCCTCGCATCCGTGCA--ACATCT
yersPest_CO92.chr_rev/569086-569283                TGCGAGCACTGATACTTGAGCAAATTGAAGGGCGTACCACCGCAGAAGTACGTCAAATTT


ec_K12.chr_fwd/3401506-3401703                     GGACGAAAGTCGCCTGCCGGAGGGCGATGTCACGGTCGATGTTCACTGGTCGAGCCTGAA
ec_O157H7.chr_fwd/4138444-4138641                  GGACGAAAGTCGCCTGCCGGAGGGCGATGTCACGGTCGATGTTCACTGGTCGAGCCTGAA
ec_APEC_O1.chr_fwd/3685781-3685978                 GGACGAAAGTCGCCAGCCGGAAGGCGATGTCACGGTTGATGTTCACTGGTCGAGCCTGAA
ente638.chr_fwd/4000173-4000370                    CGAGGCTACCCGCCTGCCCGAAGGCGACGTCACCGTTGACATTGACTGGTCCAGCCTGAA
shigFlex_2A.chr_fwd/3391056-3391253                GGACGAACGTCGCCTGCCGGAGGGCGATGTCACGGTCGATGTTCACTGGTCGAGCCTGAA
salmTyph.chr_fwd/3400613-3400810                   CGAAGAGAGTCAACTGCCGGCAGGTGATGTGACGGTGGATGTCCACTGGTCCAGCCTGAA
salmEnte_PARATYPI_ATC.chr_fwd/3353535-3353732      CGAAGAGAGTCAACTGCCGGCAGGTGATGTGACGGTGGATGTCCACTGGTCCAGCCTGAA
yersPest_CO92.chr_rev/569086-569283                CGGCCTCA--CAACTGCCTGCGGGTAATGTCACCGTAGATGTCAATTGGTCCAGCCTGAA


ec_K12.chr_fwd/3401506-3401703                     CTATAAAGATGCGCTGG
ec_O157H7.chr_fwd/4138444-4138641                  CTATAAAGATGCGCTGG
ec_APEC_O1.chr_fwd/3685781-3685978                 CTACAAAGATGCGCTGG
ente638.chr_fwd/4000173-4000370                    TTACAAGGACGCGCTCG
shigFlex_2A.chr_fwd/3391056-3391253                CTATAAAGATGCGCTGG
salmTyph.chr_fwd/3400613-3400810                   TTATAAAGATGCTCTGG
salmEnte_PARATYPI_ATC.chr_fwd/3353535-3353732      TTATAAAGATGCTCTGG
yersPest_CO92.chr_rev/569086-569283                TTATAAAGATGCGTTGG