Mercurial > repos > rnateam > package_segemehl_0_1_6

comparison tool_dependencies.xml @ 0:15c10db35624 draft

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author rnateam
date Thu, 17 Oct 2013 03:58:42 -0400
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children b23d4e44a45c
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-1:000000000000 0:15c10db35624
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="segemehl" version="0.1.6">
4 <install version="1.0">
5 <actions>
6 <action type="download_by_url">http://www.bioinf.uni-leipzig.de/Software/segemehl/segemehl_0_1_6.tar.gz</action>
7 <action type="shell_command">make</action>
8 <action type="move_file">
9 <source>segemehl.x</source>
10 <destination>$INSTALL_DIR</destination>
11 </action>
12 <action type="set_environment">
13 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
14 </action>
15 </actions>
16 </install>
17 <readme>
18 Short read mapping with gaps.
19 To compile segemehl a C-compiler is needed, usually GCC.
20 http://www.bioinf.uni-leipzig.de/Software/segemehl/
21 </readme>
22 </package>
23 </tool_dependency>