Mercurial > repos > rnateam > mafft

comparison tool_dependencies.xml @ 1:95526e9e3808 draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit c4313fc798bb8d55e27da78a3fa5d9774b95aaf7-dirty
author rnateam
date Fri, 31 Jul 2015 19:00:37 -0400
parents 8817d3a35fac
children
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0:8817d3a35fac 1:95526e9e3808
9 <action type="shell_command">make clean; make; make install</action> 9 <action type="shell_command">make clean; make; make install</action>
10 <action type="change_directory">../extensions</action> 10 <action type="change_directory">../extensions</action>
11 <action type="shell_command">sed -i "s|\(PREFIX = \).*$|\1$INSTALL_DIR|" Makefile</action> 11 <action type="shell_command">sed -i "s|\(PREFIX = \).*$|\1$INSTALL_DIR|" Makefile</action>
12 <action type="shell_command">make clean; make; make install</action> 12 <action type="shell_command">make clean; make; make install</action>
13 <action type="set_environment"> 13 <action type="set_environment">
14 <environment_variable name="MAFFT_ROOT_PATH" action="set_to">$INSTALL_DIR</environment_variable>
14 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> 15 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
15 </action> 16 </action>
16 </actions> 17 </actions>
17 </install> 18 </install>
18 <readme> 19 <readme>