Mercurial > repos > rnateam > data_manager_bowtie

comparison tool_data_table_conf.xml.sample @ 0:07578a72b9b2 draft

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author rnateam
date Tue, 10 Feb 2015 13:35:43 -0500
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-1:000000000000 0:07578a72b9b2
1 <tables>
2 <!-- Locations of all fasta files under genome directory -->
3 <table name="all_fasta" comment_char="#">
4 <columns>value, dbkey, name, path</columns>
5 <file path="tool-data/all_fasta.loc" />
6 </table>
7 <!-- Locations of indexes in the Bowtie mapper format -->
8 <table name="bowtie_indexes" comment_char="#">
9 <columns>value, dbkey, name, path</columns>
10 <file path="tool-data/bowtie_indices.loc" />
11 </table>
12 <!-- Locations of indexes in the Bowtie color-space mapper format -->
13 <table name="bowtie_indexes_color" comment_char="#">
14 <columns>value, dbkey, name, path</columns>
15 <file path="tool-data/bowtie_indices_color.loc" />
16 </table>
17 </tables>