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comparison compalignp.xml @ 8:8ebf2202a0d1 draft default tip

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author rnateam
date Mon, 08 Jun 2015 08:31:57 -0400
parents eeedd1755f92
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7:eeedd1755f92 8:8ebf2202a0d1
10 <command> 10 <command>
11 <![CDATA[ 11 <![CDATA[
12 compalignp 12 compalignp
13 -t $rna_alignment_target 13 -t $rna_alignment_target
14 -r $rna_alignment_reference 14 -r $rna_alignment_reference
15 $flag_verbose
16 > $output 15 > $output
17 ]]> 16 ]]>
18 </command> 17 </command>
19 <inputs> 18 <inputs>
20 <param format="stockholm" name="rna_alignment_target" type="data" label="Target RNA Alignment" help="(-t)" /> 19 <param format="clustalw,stockholm" name="rna_alignment_target" type="data" label="Target RNA Alignment" help="(-t)" />
21 <param format="stockholm" name="rna_alignment_reference" type="data" label="Reference RNA Alignment" help="(-r)" /> 20 <param format="clustalw,stockholm" name="rna_alignment_reference" type="data" label="Reference RNA Alignment" help="(-r)" />
22 <param name="flag_verbose" type="boolean" truevalue="-v" falsevalue="" label="Verbose output" help="(-v)" />
23 </inputs> 21 </inputs>
24 <outputs> 22 <outputs>
25 <data name="output" format="txt" /> 23 <data name="output" format="txt" />
26 </outputs> 24 </outputs>
27 <tests> 25 <tests>