Mercurial > repos > rnateam > bctools

diff tool_dependencies.xml @ 18:2c4b134a7fdd draft

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try the bedtools dependendy used by the bedtools galaxy wrappers
author rnateam
date Mon, 30 Nov 2015 11:32:21 -0500
parents 0707133311e3
children 885602df4554
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--- a/tool_dependencies.xml	Mon Nov 30 10:55:14 2015 -0500
+++ b/tool_dependencies.xml	Mon Nov 30 11:32:21 2015 -0500
@@ -9,9 +9,12 @@
     <package name="pybedtools" version="0.6.6">
         <repository changeset_revision="372c85bed2ca" name="package_pybedtools_0_6_6" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
-    <package name="bedtools" version="2.19">
-        <repository changeset_revision="3ad963111153" name="package_bedtools_2_19" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-    </package>
+    <!-- <package name="bedtools" version="2.19">
+        <repository name="package_bedtools_2_19" owner="iuc"/>
+    </package> -->
+    <requirements>
+        <requirement type="package" version="2.18.2">bedtools2</requirement>
+    </requirements>
     <package name="flexbar" version="2.5">
         <repository changeset_revision="45d1b8373762" name="package_flexbar_2_5" owner="rnateam" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>