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comparison flexbar_dsc.xml @ 26:f02e6f2ac10b draft

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author rnateam
date Thu, 17 Dec 2015 10:49:33 -0500
parents e157f49e0720
children
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25:e157f49e0720 26:f02e6f2ac10b
133 $cLogging.numTags 133 $cLogging.numTags
134 $cLogging.remTags 134 $cLogging.remTags
135 $cLogging.rndTags 135 $cLogging.rndTags
136 #end if 136 #end if
137 137
138 --target FlexbarOutput 138 --target FlexbarOutput &&
139 &&
140 for f in *_1.fastq; do mv "\$f" "`basename \$f _1.fastq`_forward.fastq"; done && 139 for f in *_1.fastq; do mv "\$f" "`basename \$f _1.fastq`_forward.fastq"; done &&
141 for f in *_2.fastq; do mv "\$f" "`basename \$f _2.fastq`_reverse.fastq"; done 140 for f in *_2.fastq; do mv "\$f" "`basename \$f _2.fastq`_reverse.fastq"; done
142 141
143 142
144 143