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comparison merge_pcr_duplicates.xml @ 9:b994884d5541 draft

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author rnateam
date Tue, 10 Nov 2015 09:46:57 -0500
parents 17ef0e0dae68
children 0b9aab6aaebf
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8:17ef0e0dae68 9:b994884d5541
16 #end if 16 #end if
17 17
18 > $default]]></command> 18 > $default]]></command>
19 <inputs> 19 <inputs>
20 <param area="false" label="bed6 file containing alignments." name="positional_1" type="data" format="bed"/> 20 <param area="false" label="bed6 file containing alignments." name="positional_1" type="data" format="bed"/>
21 <param area="false" label="fasta barcode library." name="positional_2" type="data" format="fasta"/> 21 <param area="false" label="fasta barcode library." name="positional_2" type="data" format="fastq"/>
22 </inputs> 22 </inputs>
23 <outputs> 23 <outputs>
24 <data format="bed" hidden="false" name="default"/> 24 <data format="bed" hidden="false" name="default"/>
25 </outputs> 25 </outputs>
26 <tests> 26 <tests>
27 <test> 27 <test>
28 <param name="positional_1" value="pcr_dupes_sorted_2.bed"/> 28 <param name="positional_1" value="pcr_dupes_sorted_2.bed"/>
29 <param name="positional_2" value="pcr_dupes_randomdict.fa"/> 29 <param name="positional_2" value="pcr_dupes_randomdict.fastq"/>
30 <output name="default" file="merged_pcr_dupes.bed"/> 30 <output name="default" file="merged_pcr_dupes.bed"/>
31 </test> 31 </test>
32 </tests> 32 </tests>
33 <help><![CDATA[ 33 <help><![CDATA[
34 Merge PCR duplicates according to random barcode library. 34 Merge PCR duplicates according to random barcode library.