Mercurial > repos > recetox > xmsannotator_advanced

comparison xmsannotator_macros.xml @ 3:3bdef6d114fd draft

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"planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/xmsannotator commit de75adf885d616bbe94c8087d3208a2b5039418e"
author recetox
date Thu, 08 Oct 2020 00:41:36 +0000
parents f8b5c1c9661e
children 47185b5abe9e
comparison
equal deleted inserted replaced
2:f8b5c1c9661e 3:3bdef6d114fd
1 <macros> 1 <macros>
2 <token name="@TOOL_VERSION@">1.3.2</token> 2 <token name="@TOOL_VERSION@">1.3.2</token>
3 <xml name="requirements"> 3 <token name="@DOCKER_IMAGE@">recetox/xmsannotator:1.3.2-recetox0</token>
4 <requirements>
5 <container type="docker">recetox/xmsannotator:1.3.2-recetox0</container>
6 </requirements>
7 </xml>
8 4
9 <xml name="annotation"> 5 <xml name="annotation">
10 <param name="peaks" type="data" format="h5" label="Peaks" help="Table of peaks to annotate."/> 6 <param name="peaks" type="data" format="h5" label="Peaks" help="Peaks to annotate."/>
11 <param name="metabolites" type="data" format="h5" label="Metabolite database"/>
12 <param name="adducts" type="data" format="h5" label="Adduct database"/> 7 <param name="adducts" type="data" format="h5" label="Adduct database"/>
13 8 <param name="compounds" type="data" format="h5" label="Compound database"/>
14 9
15 <param name="mz_tolerance_ppm" type="float" value="5" min="0" label="Mass tolerance [ppm]" help="Mass tolerance in ppm for database matching."/> 10 <param name="mz_tolerance_ppm" type="float" value="5" min="0" label="Mass tolerance [ppm]" help="Mass tolerance in ppm for database matching."/>
16 </xml>
17
18 <xml name="output">
19 <data format="h5" name="annotation"/>
20 </xml> 11 </xml>
21 12
22 <xml name="citations"> 13 <xml name="citations">
23 <citations> 14 <citations>
24 <citation type="doi">10.1021/acs.analchem.6b01214</citation> 15 <citation type="doi">10.1021/acs.analchem.6b01214</citation>