Mercurial > repos > recetox > waveica

comparison macros.xml @ 6:cf3f2f964d80 draft

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planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit d82e7dad96bebe9424ac7bf490e2786d82c3681a
author recetox
date Thu, 29 Sep 2022 15:20:18 +0000
parents fba892edb9d9
children 385b1221be44
comparison
equal deleted inserted replaced
5:fba892edb9d9 6:cf3f2f964d80
6 <person 6 <person
7 givenName="Maksym" 7 givenName="Maksym"
8 familyName="Skoryk" 8 familyName="Skoryk"
9 url="https://github.com/maximskorik" 9 url="https://github.com/maximskorik"
10 identifier="0000-0003-2056-8018" /> 10 identifier="0000-0003-2056-8018" />
11 <person
12 givenName="Zargham"
13 familyName="Ahmad"
14 url="https://github.com/zargham-ahmad"
15 identifier="0000-0002-6096-224X" />
11 <organization 16 <organization
12 url="https://www.recetox.muni.cz/" 17 url="https://www.recetox.muni.cz/"
13 email="GalaxyToolsDevelopmentandDeployment@space.muni.cz" 18 email="GalaxyToolsDevelopmentandDeployment@space.muni.cz"
14 name="RECETOX MUNI" /> 19 name="RECETOX MUNI" />
15 </creator> 20 </creator>
16 </xml> 21 </xml>
17 22
23 <xml name="input_data">
24 <param type="data" name="data" label="Feature table" format="csv,tsv,parquet" help=""/>
25 </xml>
18 <xml name="general_parameters"> 26 <xml name="general_parameters">
19 <param type="data" name="data" label="Feature table" format="csv" help=""/>
20 <param type="integer" value="20" name="k" label="Number of components to decompose" help="maximal component that ICA decomposes"/> 27 <param type="integer" value="20" name="k" label="Number of components to decompose" help="maximal component that ICA decomposes"/>
21 <param type="float" value="0" name="alpha" label="Alpha" help="trade-off value between the independence of samples (temporal ICA) and variables (spatial ICA), should be between 0 and 1"/> 28 <param type="float" value="0" name="alpha" label="Alpha" help="trade-off value between the independence of samples (temporal ICA) and variables (spatial ICA), should be between 0 and 1"/>
22 </xml> 29 </xml>
23 <xml name="batchwise_parameters"> 30 <xml name="batchwise_parameters">
24 <param type="float" value="0.05" name="t" label="Batch-association threshold" help="threshold to consider a component associate with the batch, 31 <param type="float" value="0.05" name="t" label="Batch-association threshold" help="threshold to consider a component associate with the batch,
84 </conditional> 91 </conditional>
85 </xml> 92 </xml>
86 93
87 <xml name="outputs"> 94 <xml name="outputs">
88 <outputs> 95 <outputs>
89 <data name="normalized_data" format="tsv" /> 96 <data format_source="data" name="normalized_data"/>
90 </outputs> 97 </outputs>
91 </xml> 98 </xml>
92 99
93 <token name="@HELP@"><![CDATA[ 100 <token name="@HELP@"><![CDATA[
94 **Description** 101 **Description**