Mercurial > repos > recetox > retip_train

comparison retip_train.xml @ 8:e7771b3d6a40 draft default tip

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"planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/retip commit 9bc547872c98a9c13c561d15e8990fe82bdc0e72"
author recetox
date Fri, 28 Jan 2022 16:29:45 +0000
parents 9012a9dba1db
children
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7:fc3e026406c5 8:e7771b3d6a40
1 <tool id="retip_train" name="Retip training" version="@TOOL_VERSION@+galaxy3"> 1 <tool id="retip_train" name="Retip training" version="@TOOL_VERSION@+galaxy3">
2 <description>the Keras model to predict retention times</description> 2 <description>the Keras model to predict retention times</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="creator"/>
7
6 <expand macro="requirements"/> 8 <expand macro="requirements"/>
7 <command detect_errors="exit_code"><![CDATA[ 9 <command detect_errors="exit_code"><![CDATA[
8 /run.sh trainKeras.R '$descr_train' 'model.h5' 10 /run.sh trainKeras.R '$descr_train' 'model.h5'
9 ]]> 11 ]]>
10 </command> 12 </command>
19 <test expect_num_outputs="1"> 21 <test expect_num_outputs="1">
20 <param name="descr_train" value="descriptors.h5"/> 22 <param name="descr_train" value="descriptors.h5"/>
21 <output name="output1" file="model.h5" ftype="h5" compare="sim_size" delta="1000"/> 23 <output name="output1" file="model.h5" ftype="h5" compare="sim_size" delta="1000"/>
22 </test> 24 </test>
23 </tests> 25 </tests>
24 <help><![CDATA[ 26 <help>
25 .. class:: infomark 27 <![CDATA[
28 .. class:: infomark
26 29
27 This tool uses ALMA mater: Advanced Learning Machine Algorithms to **train models**. 30 This tool uses ALMA mater: Advanced Learning Machine Algorithms to **train models**.
28 31
29 @HELP@ 32 @HELP@
30 ]]> 33 ]]>
31 </help> 34 </help>
32 <expand macro="citations"/> 35 <expand macro="citations"/>
33 </tool> 36 </tool>