Mercurial > repos > recetox > recetox_aplcms_merge_known_table

comparison recetox_aplcms_merge_known_table.xml @ 6:e9b8f9db0bd5 draft default tip

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planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/recetox_aplcms commit 0873c036d734782d2647b0eea84cd1a0658f5e58
author recetox
date Wed, 19 Jul 2023 00:23:23 +0000
parents 0e2ddbeb88eb
children
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5:0e2ddbeb88eb 6:e9b8f9db0bd5
73 help="Choose between merging feature to known_table and known_table to features."> 73 help="Choose between merging feature to known_table and known_table to features.">
74 <option value="TRUE">Merge features to known table</option> 74 <option value="TRUE">Merge features to known table</option>
75 <option value="FALSE">Merge known table to features</option> 75 <option value="FALSE">Merge known table to features</option>
76 </param> 76 </param>
77 <when value="TRUE"> 77 <when value="TRUE">
78 <param name="new_feature_min_count" type="integer" value="2" min="1" label="new_feature_min_count" 78 <param name="new_feature_min_count" type="integer" value="2" min="1" label="Minimal occurence of feature"
79 help="The minimum number of occurrences of a historically unseen (unknown) feature to add 79 help="The minimum number of occurrences of a historically unseen (unknown) feature to add
80 this feature into the database of known features." /> 80 this feature into the database of known features." />
81 </when> 81 </when>
82 </conditional> 82 </conditional>
83 83
84 <param name="match_tol_ppm" type="integer" optional="true" min="0" label="match_tol_ppm" 84 <param name="match_tol_ppm" type="integer" optional="true" min="0" label="Match tolerance [ppm]"
85 help="The ppm tolerance to match identified features to known metabolites/features." /> 85 help="The ppm tolerance to match identified features to known metabolites/features." />
86 </inputs> 86 </inputs>
87 87
88 <outputs> 88 <outputs>
89 <data name="output_metadata_file" format="parquet" label="${tool.name} on ${on_string} (metadata table)"> 89 <data name="output_metadata_file" format="parquet" label="${tool.name} on ${on_string} (metadata table)">