Mercurial > repos > recetox > ramclustr_xcms

comparison ramclustr_wrapper.R @ 1:8f4d04ad4acd draft

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"planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/ramclustr commit 36ea15ec5b1f1899f28c3a92d3a55dd6ac3dffae"
author recetox
date Wed, 13 Jan 2021 11:42:07 +0000
parents a0c69d354b96
children 405c8f8dc073
comparison
equal deleted inserted replaced
0:a0c69d354b96 1:8f4d04ad4acd
81 replace_zeros, 81 replace_zeros,
82 st = NULL, 82 st = NULL,
83 maxt = NULL, 83 maxt = NULL,
84 fftempdir = NULL 84 fftempdir = NULL
85 ) { 85 ) {
86 if (!file.exists(idmsms))
87 idmsms <- NULL
88
86 x <- RAMClustR::ramclustR( 89 x <- RAMClustR::ramclustR(
87 ms = ms, 90 ms = ms,
88 idmsms = idmsms, 91 idmsms = idmsms,
89 featdelim = feature_delimiter, 92 featdelim = feature_delimiter,
90 timepos = retention_time_column, 93 timepos = retention_time_column,