# HG changeset patch
# User recetox
# Date 1635510284 0
# Node ID 8fcf5ca25f5daed4be1b0cbcfe95c936054e8803
# Parent  e2e2e455fcfb09a11df4ae66c6605a3bb53207b9
"planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/recetox-xmsannotator commit b26a7ce6459f8e456fd166ba1aaada4e7e66dfa6"

diff -r e2e2e455fcfb -r 8fcf5ca25f5d macros.xml
--- a/macros.xml	Fri Oct 29 09:49:13 2021 +0000
+++ b/macros.xml	Fri Oct 29 12:24:44 2021 +0000
@@ -36,6 +36,9 @@
                 The database is required to contain <em>adduct</em>, <em>charge</em>, <em>mass</em>, and <em>n_molecules</em>.
             ]]></help>
         </param>
+        <param name="adduct_weights" type="data" format="csv" optional="true">
+            <label>adduct_weights</label>
+        </param>
     </xml>
 
     <xml name="outputs">
diff -r e2e2e455fcfb -r 8fcf5ca25f5d october_recetox_xmsannotator_advanced.xml
--- a/october_recetox_xmsannotator_advanced.xml	Fri Oct 29 09:49:13 2021 +0000
+++ b/october_recetox_xmsannotator_advanced.xml	Fri Oct 29 12:24:44 2021 +0000
@@ -18,6 +18,7 @@
                 peak_table = load_peak_table_parquet("${peak_table}"),
             #end if
                 adduct_table = load_adduct_table_parquet("${adduct_table}"),
+                adduct_weights = as.data.frame("${adduct_weights}"),
                 compound_table = load_compound_table_parquet("${compound_table}"),
                 mass_tolerance = 1e-6 * ${mass_tolerance_ppm},
                 time_tolerance = $time_tolerance,
@@ -54,7 +55,6 @@
                 <label>Retention time tolerance [s]</label>
                 <help>
                     Retention time tolerance in seconds for finding peaks derived from the same parent compound.
-
                 </help>
             </param>
         </expand>