Mercurial > repos > recetox > october_recetox_xmsannotator_advanced

diff october_recetox_xmsannotator_advanced.xml @ 1:8fcf5ca25f5d draft

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"planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/recetox-xmsannotator commit b26a7ce6459f8e456fd166ba1aaada4e7e66dfa6"
author recetox
date Fri, 29 Oct 2021 12:24:44 +0000
parents e2e2e455fcfb
children 116ec7c1c038
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line diff
--- a/october_recetox_xmsannotator_advanced.xml	Fri Oct 29 09:49:13 2021 +0000
+++ b/october_recetox_xmsannotator_advanced.xml	Fri Oct 29 12:24:44 2021 +0000
@@ -18,6 +18,7 @@
                 peak_table = load_peak_table_parquet("${peak_table}"),
             #end if
                 adduct_table = load_adduct_table_parquet("${adduct_table}"),
+                adduct_weights = as.data.frame("${adduct_weights}"),
                 compound_table = load_compound_table_parquet("${compound_table}"),
                 mass_tolerance = 1e-6 * ${mass_tolerance_ppm},
                 time_tolerance = $time_tolerance,
@@ -54,7 +55,6 @@
                 <label>Retention time tolerance [s]</label>
                 <help>
                     Retention time tolerance in seconds for finding peaks derived from the same parent compound.
-
                 </help>
             </param>
         </expand>