Mercurial > repos > recetox > aplcms_to_ramclustr_converter

diff hdf_converter.py @ 1:52470d439e50 draft

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"planemo upload for repository https://github.com/RECETOX/galaxytools/tools/hdf_converter/ commit 9a479980d3432f6f1a4541bac75b4ccc40d189ee"
author recetox
date Wed, 16 Dec 2020 17:28:30 +0000
parents 062f4c571a24
children 644192cf22a5
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line diff
--- a/hdf_converter.py	Tue Dec 15 17:38:07 2020 +0000
+++ b/hdf_converter.py	Wed Dec 16 17:28:30 2020 +0000
@@ -53,8 +53,8 @@
     except KeyError:
         sys.exit("Selected table does not exist in HDF dataframe")
 
-    RamClutsr_data = join_samples(aplcms_table)
-    RamClustr_data = convert_to_RamClustR(RamClutsr_data)
+    RamClustr_data = join_samples(aplcms_table)
+    RamClustr_data = convert_to_RamClustR(RamClustr_data)
     output = args[0]
     RamClustr_data.to_csv(output, sep=';')
     print("Table '{}' of HDF dataset is converted to csv for RamClutsR".format(options.table))