Mercurial > repos > rdvelazquez > hyphy_fade

diff hyphy_fade.xml @ 7:a7305e34418f draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'446f1cfedd192ab0e7456495383c2099331379cc\n'-dirty
author rdvelazquez
date Mon, 11 Feb 2019 14:12:14 -0500
parents e445c2dc2cce
children 4377e155b9d1
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line diff
--- a/hyphy_fade.xml	Tue Nov 20 12:18:32 2018 -0500
+++ b/hyphy_fade.xml	Mon Feb 11 14:12:14 2019 -0500
@@ -38,8 +38,8 @@
     #end if
     ]]></command>
   <inputs>
-    <param name="input_file" type="data" format="fasta" label="Input FASTA file"/>
-    <param name="input_nhx" type="data" format="nhx" label="Input newick file"/>
+    <param name="input_file" type="data" format="fasta" label="Input amino acid FASTA file"/>
+    <param name="input_nhx" type="data" format="nhx" label="Input rooted newick file"/>
     <param name="branches" type="select" label="Set of branches to test">
       <option value="1">All branches</option>
       <option value="2">Internal branches</option>
@@ -98,7 +98,7 @@
   </inputs>
   <outputs>
     <data name="fade_log" format="txt"/>
-    <data name="fade_output" format="json" from_work_dir="fade_input.fa.FADE.json"/>
+    <data name="fade_output" format="hyphy_json_results" from_work_dir="fade_input.fa.FADE.json"/>
   </outputs>
   <tests>
     <test>