Mercurial > repos > proteore > proteore_venn_diagram

changeset 11:495fbe40cd71 draft default tip

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"planemo upload commit 81a97a9eef7aebab9298769be9141af617beef77-dirty"
author proteore
date Tue, 08 Jun 2021 14:21:50 +0000
parents 5fe9b246e395
children
files releases_notes.rst venn_diagram.xml
diffstat 2 files changed, 26 insertions(+), 7 deletions(-) [+]
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/releases_notes.rst	Tue Jun 08 14:21:50 2021 +0000
@@ -0,0 +1,19 @@
+=============================
+Venn diagram - Releases Notes
+=============================
+
+==================
+2019-05-13 Release
+==================
+
+New
+---
+
+Improvements
+------------
+
+- handle multiple IDs per line in input file (";" separated)
+- better handle of copy/paste 
+
+Fixes
+-----
--- a/venn_diagram.xml	Wed May 12 16:43:44 2021 +0000
+++ b/venn_diagram.xml	Tue Jun 08 14:21:50 2021 +0000
@@ -1,26 +1,26 @@
 <?xml version="1.0"?>
-<tool id="Jvenn" name="Venn diagram" version="2021.05.12">
+<tool id="jvenn" name="venn diagram" version="2021.06.08" profile="20.01">
 	<description>[JVenn]
 	</description>
 <requirements>
 <requirement type="package" version="3.7.3">python</requirement>
 </requirements>
 	<command><![CDATA[
-		python $__tool_directory__/venn_diagram.py
+		python '$__tool_directory__/venn_diagram.py'
 
 		#for $i, $s in enumerate($series)
 		    --input
 		    #if $s.se.input == "file"
-		        "$s.se.file" "$s.name" "file" "$s.se.header" "$s.se.ncol"
+		        '$s.se.file' '$s.name' 'file' '$s.se.header' '$s.se.ncol'
 		    #else
-                "$s.se.list" "$s.name" "list"
+                '$s.se.list' '$s.name' 'list'
  		    #end if
 		#end for 
-		--summary "$output_summary"
+		--summary '$output_summary'
 	]]></command>
 	<inputs>
-		<!-- Files -->
-		<repeat name="series" title="List to compare" min="2" max="6" >
+	    <!-- Files -->
+	    <repeat name="series" title="List to compare" min="2" max="6" >
             <conditional name="se" >
 				<param type="select" name="input" label="Enter your list" help="Copy/paste or from a file (e.g. table)" >
 					<option value="list">Copy/paste list </option>