Mercurial > repos > proteore > proteore_venn_diagram
changeset 5:5f8462a9de89 draft
planemo upload commit fb27a6b5de5cd7b269a41be3c85c593b77aa1b18-dirty
| author | proteore |
|---|---|
| date | Thu, 27 Jun 2019 04:23:23 -0400 |
| parents | c3bbc688dde2 |
| children | 95bbe3a6b09f |
| files | venn_diagram.xml |
| diffstat | 1 files changed, 10 insertions(+), 6 deletions(-) [+] |
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--- a/venn_diagram.xml Mon May 13 09:55:45 2019 -0400 +++ b/venn_diagram.xml Thu Jun 27 04:23:23 2019 -0400 @@ -1,5 +1,5 @@ <?xml version="1.0"?> -<tool id="Jvenn" name="Venn diagram" version="2019.05.13"> +<tool id="Jvenn" name="Venn diagram" version="2019.06.27"> <description>[JVenn] </description> <command><![CDATA[ @@ -103,7 +103,7 @@ ----- -**Inputs** +**Input** Can be either a list entered in a copy/paste mode or a single or multi-columns file (txt, tsv, csv, tab, output from other tools) up to six lists/files @@ -137,7 +137,11 @@ "P14923" "Q13835" -All ids will be used (Q06830,P60709,P13646 and P31949 will be split). +All ID will be considered (i.e. Q06830,P60709,P13646 and P31949 will be split). + +.. class:: warningmark + +In copy/paste mode, the number of IDs considered in input is limited to 5000. ----- @@ -151,7 +155,7 @@ Two outputs are generated: -* **Graphical file**: Venn diagram that you can either display (interactive mode) or download as image (PNG, SVG format) +* **Graphical file**: Venn diagram that you can either display (interactive mode) or download as an image (PNG, SVG format) * **Venn text output file** : a text file containing specific elements or shared by lists/files. @@ -167,11 +171,11 @@ **Galaxy integration** -T.P. Lien Nguyen, Florence Combes, Yves Vandenbrouck CEA, INSERM, CNRS, Grenoble-Alpes University, BIG Institute, FR +Lien Nguyen, David Chistiany, Florence Combes, Yves Vandenbrouck CEA, INSERM, CNRS, Grenoble-Alpes University, BIG Institute, FR Sandra Dérozier, Olivier Rué, Christophe Caron, Valentin Loux INRA, Paris-Saclay University, MAIAGE Unit,Migale Bioinformatics platform -Contact support@proteore.org for any questions or concerns about the Galaxy implementation of this tool. +Help: contact@proteore.org for any questions or concerns about this tool. ]]></help> <citations> </citations>
