Mercurial > repos > proteore > proteore_prot_features

comparison add_protein_features.xml @ 19:381e18f13ed2 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload commit 6a3a63d9870148e6fee84e771db614f9da9a8245-dirty"
author proteore
date Thu, 30 Jul 2020 09:45:47 +0000
parents bdbc7620e804
children 3c5813b29486
comparison
equal deleted inserted replaced
18:bdbc7620e804 19:381e18f13ed2
1 <tool id="prot_features" name="Add protein features" version="2020.07.30"> 1 <tool id="prot_features" name="Add protein features" version="2020.07.30.1">
2 <description>[neXtProt, Human] 2 <description>[neXtProt, Human]
3 </description> 3 </description>
4 <requirements> 4 <requirements>
5 <requirement type="package" version="3.4.1">R</requirement> 5 <requirement type="package" version="3.4.1">R</requirement>
6 </requirements> 6 </requirements>
140 140
141 **Output** 141 **Output**
142 142
143 Output is a tabular file containing both original columns and new columns including the annotation requested. 143 Output is a tabular file containing both original columns and new columns including the annotation requested.
144 144
145 .. class:: warningmark
146
147 "Protein name","Protein function","Post translational modifications","Protein family","Pathway(s)" options will not work will releases older than 08/2020.
148
145 ----- 149 -----
146 150
147 **Data source (release date)** 151 **Data source (release date)**
148 152
149 Annotations have been retrieved using a REST API (https://academic.oup.com/nar/article/43/D1/D764/2439066#40348985) (Gaudet et al., 2017) 153 Annotations have been retrieved using a REST API (https://academic.oup.com/nar/article/43/D1/D764/2439066#40348985) (Gaudet et al., 2017)