Mercurial > repos > proteore > proteore_id_converter

diff id_converter.xml @ 8:f0029ded78dd draft

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planemo upload commit 15a63914a747634bfddd93d68187084d9a6ca4fb-dirty
author proteore
date Tue, 18 Sep 2018 04:55:47 -0400
parents afd065e7cb35
children cf91623c09f5
line wrap: on
line diff
--- a/id_converter.xml	Mon Sep 10 08:32:21 2018 -0400
+++ b/id_converter.xml	Tue Sep 18 04:55:47 2018 -0400
@@ -1,4 +1,4 @@
-<tool id="IDconverter" name="ID Converter" version="2018.09.10">
+<tool id="IDconverter" name="ID Converter" version="2018.09.18">
     <description>convert public database identifiers
     </description>
     <requirements>
@@ -71,9 +71,9 @@
                     <option value="PIR" >Protein Information Resource ID (e.g. S34755)</option>
                     <option value="MIM" >OMIM (Online Mendelian Inheritance in Man database) ID (e.g: 601289)</option>
                     <option value="UniGene" >Unigene ID (e.g. Hs.643544)</option>
-                    <option value="Ensembl" >Ensembl gene ID (e.g. ENSG00000166913)</option>
-                    <option value="Ensembl_TRS" >Ensembl transcript ID (e.g. ENST00000353703)</option>
-                    <option value="Ensembl_PRO" >Ensembl protein ID (e.g. ENSP00000300161)</option>
+                    <option value="Ensembl_Gene" >Ensembl gene ID (e.g. ENSG00000166913)</option>
+                    <option value="Ensembl_Transcript" >Ensembl transcript ID (e.g. ENST00000353703)</option>
+                    <option value="Ensembl_Protein" >Ensembl protein ID (e.g. ENSP00000300161)</option>
                     <option value="BioGrid" >BioGrid (e.g. 113361)</option>
                     <option value="STRING" >STRING (e.g. 9606.ENSP00000300161)</option>
                     <option value="KEGG" >KEGG (e.g. hsa:7529)</option>
@@ -91,9 +91,9 @@
                         <option value="PIR" >Protein Information Resource ID (e.g. S34755)</option>
                         <option value="MIM" >OMIM (Online Mendelian Inheritance in Man database) ID (e.g: 601289)</option>
                         <option value="UniGene" >Unigene ID (e.g. Hs.643544)</option>
-                        <option value="Ensembl" >Ensembl gene ID (e.g. ENSG00000166913)</option>
-                        <option value="Ensembl_TRS" >Ensembl transcript ID (e.g. ENST00000353703)</option>
-                        <option value="Ensembl_PRO" >Ensembl protein ID (e.g. ENSP00000300161)</option>
+                        <option value="Ensembl_Gene" >Ensembl gene ID (e.g. ENSG00000166913)</option>
+                        <option value="Ensembl_Transcript" >Ensembl transcript ID (e.g. ENST00000353703)</option>
+                        <option value="Ensembl_Protein" >Ensembl protein ID (e.g. ENSP00000300161)</option>
                         <option value="BioGrid" >BioGrid (e.g. 113361)</option>
                         <option value="STRING" >STRING (e.g. 9606.ENSP00000300161)</option>
                         <option value="KEGG" >KEGG (e.g. hsa:7529)</option>
@@ -112,9 +112,9 @@
                     <option value="PIR" >Protein Information Resource ID (e.g. S34755)</option>
                     <option value="MIM" >OMIM (Online Mendelian Inheritance in Man database) ID (e.g: 601289)</option>
                     <option value="UniGene" >Unigene ID (e.g. Hs.643544)</option>
-                    <option value="Ensembl" >Ensembl gene ID (e.g. ENSG00000166913)</option>
-                    <option value="Ensembl_TRS" >Ensembl transcript ID (e.g. ENST00000353703)</option>
-                    <option value="Ensembl_PRO" >Ensembl protein ID (e.g. ENSP00000300161)</option>
+                    <option value="Ensembl_Gene" >Ensembl gene ID (e.g. ENSG00000166913)</option>
+                    <option value="Ensembl_Transcript" >Ensembl transcript ID (e.g. ENST00000353703)</option>
+                    <option value="Ensembl_Protein" >Ensembl protein ID (e.g. ENSP00000300161)</option>
                     <option value="BioGrid" >BioGrid (e.g. 113361)</option>
                     <option value="STRING" >STRING (e.g. 9606.ENSP00000300161)</option>
                     <option value="KEGG" >KEGG (e.g. hsa:7529)</option>
@@ -131,9 +131,9 @@
                         <option value="PIR" >Protein Information Resource ID (e.g. S34755)</option>
                         <option value="MIM" >OMIM (Online Mendelian Inheritance in Man database) ID (e.g: 601289)</option>
                         <option value="UniGene" >Unigene ID (e.g. Hs.643544)</option>
-                        <option value="Ensembl" >Ensembl gene ID (e.g. ENSG00000166913)</option>
-                        <option value="Ensembl_TRS" >Ensembl transcript ID (e.g. ENST00000353703)</option>
-                        <option value="Ensembl_PRO" >Ensembl protein ID (e.g. ENSP00000300161)</option>
+                        <option value="Ensembl_Gene" >Ensembl gene ID (e.g. ENSG00000166913)</option>
+                        <option value="Ensembl_Transcript" >Ensembl transcript ID (e.g. ENST00000353703)</option>
+                        <option value="Ensembl_Protein" >Ensembl protein ID (e.g. ENSP00000300161)</option>
                         <option value="BioGrid" >BioGrid (e.g. 113361)</option>
                         <option value="STRING" >STRING (e.g. 9606.ENSP00000300161)</option>
                         <option value="KEGG" >KEGG (e.g. hsa:7529)</option>