# HG changeset patch # User proteore # Date 1579854334 0 # Node ID 0ce8b8d2322f717220cd9d04639aa226fd4c10a6 # Parent 64681d9836e732d6144ab652b84417aec4c8a7eb "planemo upload commit 889d13f87b8ee67aabc4a773cd55cea7285fe08b-dirty" diff -r 64681d9836e7 -r 0ce8b8d2322f add_expression_data.xml --- a/add_expression_data.xml Thu Jan 23 11:14:08 2020 +0000 +++ b/add_expression_data.xml Fri Jan 24 08:25:34 2020 +0000 @@ -1,4 +1,4 @@ - + (RNAseq or Immuno-assays)[Human Protein Atlas] @@ -137,7 +137,7 @@ - RNA tissue specificity abundance in 'Transcript Per Million': For each gene is reported the tissue specificity abundance in 'Transcript Per Million' (TPM) as the sum of the TPM values of all its protein-coding transcripts. -- RNA non-specific tissue abundance in 'Transcript Per Million': please refer to http://www.proteinatlas.org/about/assays+annotation#rna. +- RNA non-specific tissue abundance in 'Transcript Per Million' (only available from 23/10/2018 release): please refer to http://www.proteinatlas.org/about/assays+annotation#rna. ----- @@ -147,9 +147,13 @@ ----- -**Data sources (release date)** +**HPA source file version (release date)** + +Release date 23/10/2018: data are based on the Human Protein Atlas version 18.1 and Ensembl version 88.38 -HPA source file (data are based on the Human Protein Atlas version 18.1 and Ensembl version 88.38): http://www.proteinatlas.org/download/proteinatlas.tab.gz +Release date 21/01/2020: a subset of the data in the Human Protein Atlas version 19.1 + +downloaded from: http://www.proteinatlas.org/download/proteinatlas.tab.gz -----