# HG changeset patch # User proteore # Date 1557394102 14400 # Node ID ebdd4961c6c2f77354cd1b11386e092c5e30d9cd # Parent 4296fb613d9d892b713a014466c4e6691b30981b planemo upload commit 03015f58ac7e7ba3cc44ba0d8899eacfaaf5a134-dirty diff -r 4296fb613d9d -r ebdd4961c6c2 data_manager/resource_building.py --- a/data_manager/resource_building.py Tue May 07 10:29:13 2019 -0400 +++ b/data_manager/resource_building.py Thu May 09 05:28:22 2019 -0400 @@ -244,7 +244,7 @@ name_dict={"Human" : "Homo sapiens", "Mouse" : "Mus musculus", "Rat" : "Rattus norvegicus"} name = species +" (" + name_dict[species]+" "+time.strftime("%d/%m/%Y")+")" release = species+"_id_mapping_"+ time.strftime("%d-%m-%Y") - id = str(10000000000 - int(time.strftime("%d%m%Y"))) #new ids must be inferior to previous id -> sort by in xml only in descending order + id = str(10000000000 - int(time.strftime("%Y%m%d"))) #new ids must be inferior to previous id -> sort by in xml only in descending order data_table_entry = dict(id=id, release=release , name = name, species = species, value = path) _add_data_table_entry(data_manager_dict, data_table_entry, "proteore_id_mapping_"+species) diff -r 4296fb613d9d -r ebdd4961c6c2 data_manager/resource_building.xml --- a/data_manager/resource_building.xml Tue May 07 10:29:13 2019 -0400 +++ b/data_manager/resource_building.xml Thu May 09 05:28:22 2019 -0400 @@ -1,4 +1,4 @@ - + to create or update reference files for proteore tools diff -r 4296fb613d9d -r ebdd4961c6c2 tool-data/proteore_id_mapping_Human.loc.sample --- a/tool-data/proteore_id_mapping_Human.loc.sample Tue May 07 10:29:13 2019 -0400 +++ b/tool-data/proteore_id_mapping_Human.loc.sample Thu May 09 05:28:22 2019 -0400 @@ -1,3 +1,3 @@ #This file lists the locations of reference file for id_converter tool -# -#9979819899 human_id_mapping_01-01-2018 Human (homo sapiens) human_id_mapping tool-data/human_id_mapping.tsv +# +9979818977 human_id_mapping_23-10-2018 Human (homo sapiens 23/10/2018) Human tool-data/human_id_mapping_23-10-2018.tsv \ No newline at end of file diff -r 4296fb613d9d -r ebdd4961c6c2 tool-data/proteore_id_mapping_Mouse.loc.sample --- a/tool-data/proteore_id_mapping_Mouse.loc.sample Tue May 07 10:29:13 2019 -0400 +++ b/tool-data/proteore_id_mapping_Mouse.loc.sample Thu May 09 05:28:22 2019 -0400 @@ -1,3 +1,3 @@ #This file lists the locations of reference file for id_converter tool -# -#9979819899 mouse_id_mapping_01-01-2018 Mouse (Mus musculus) mouse_id_mapping tool-data/mouse_id_mapping.tsv +# +9979818977 mouse_id_mapping_23-10-2018 Mouse (Mus musculus 23-10-2018) Mouse tool-data/mouse_id_mapping_23-10-2018.tsv diff -r 4296fb613d9d -r ebdd4961c6c2 tool-data/proteore_id_mapping_Rat.loc.sample --- a/tool-data/proteore_id_mapping_Rat.loc.sample Tue May 07 10:29:13 2019 -0400 +++ b/tool-data/proteore_id_mapping_Rat.loc.sample Thu May 09 05:28:22 2019 -0400 @@ -1,3 +1,3 @@ #This file lists the locations of reference file for id_converter tool -# -#9979819899 rat_id_mapping_01-01-2018 Rat (Rattus norvegicus) rat_id_mapping tool-data/rat_id_mapping.tsv +# +9979818977 rat_id_mapping_23-10-2018 Rat (Rattus norvegicus 23-10-2018) Rat tool-data/rat_id_mapping_23-10-2018.tsv