# HG changeset patch
# User proteore
# Date 1591364993 0
# Node ID bb552aa4b9ac150931c17f1df1ed5b189b3eda52
# Parent  93bb1170280dd43e3f77675774519183074bba16
"planemo upload commit 59b014e9f6e2d668cbd7c4844b10db3d59baefd8-dirty"

diff -r 93bb1170280d -r bb552aa4b9ac data_manager/resource_building.py
--- a/data_manager/resource_building.py	Fri Jun 05 13:38:12 2020 +0000
+++ b/data_manager/resource_building.py	Fri Jun 05 13:49:53 2020 +0000
@@ -281,17 +281,16 @@
     return (path)
 
 def id_list_from_nextprot_ftp(file,target_directory) :
+    ftp_dir = "pub/current_release/ac_lists/"
     path = os.path.join(target_directory, file)
     ftp = ftplib.FTP("ftp.nextprot.org")
     ftp.login("anonymous", "anonymous") 
-    ftp.cwd("pub/current_release/ac_lists/")
-    r = StringIO()
-    ftp.retrlines("RETR " + file, lambda line: r.write(line + '\n'))
+    ftp.cwd(ftp_dir)
+    ftp.retrbinary("RETR " + file, open(path, 'wb').write)
     ftp.quit()
-    r.seek(0)
-    ids = r.readlines()
-    ids = [id.strip('\n') for id in ids if id != '']
-    return (ids)
+    with open(path,'r') as nextprot_ids :
+        nextprot_ids = nextprot_ids.read().splitlines()
+    return (nextprot_ids)
 
 #return '' if there's no value in a dictionary, avoid error
 def access_dictionary (dico,key1,key2) :
diff -r 93bb1170280d -r bb552aa4b9ac data_manager/resource_building.xml
--- a/data_manager/resource_building.xml	Fri Jun 05 13:38:12 2020 +0000
+++ b/data_manager/resource_building.xml	Fri Jun 05 13:49:53 2020 +0000
@@ -1,9 +1,8 @@
-<tool id="data_manager_proteore" name="Get source files for proteore tools" version="2020.06.05.1" tool_type="manage_data">
+<tool id="data_manager_proteore" name="Get source files for proteore tools" version="2020.06.05.2" tool_type="manage_data">
 <description>
 to create or update reference files for proteore tools
 </description>
 <requirements>
-    <requirement type="package" version="3.8.2">python</requirement>
 </requirements>
 <stdio>
   <exit_code range="1:" />