# HG changeset patch # User proteore # Date 1557476520 14400 # Node ID 6cbb76823b7b786edd3cd696d84b248c94aed742 # Parent ebdd4961c6c2f77354cd1b11386e092c5e30d9cd planemo upload commit 3e8aad84b7fe9218370364b1aef3ea5779475f9f-dirty diff -r ebdd4961c6c2 -r 6cbb76823b7b data_manager/resource_building.py --- a/data_manager/resource_building.py Thu May 09 05:28:22 2019 -0400 +++ b/data_manager/resource_building.py Fri May 10 04:22:00 2019 -0400 @@ -572,13 +572,15 @@ for tm in tm_domains : all_tm_domains.add(tm['cvTermName']) nb_domains+=1 - # print "nb domains ++" - # print (nb_domains) + #print "nb domains ++" + #print (nb_domains) nextprot_file[:] = [] nextprot_file.append([id,mass_mol,str(seq_length),iso_elec_point,chr_loc,all_subcell_locs,all_diseases,str(nb_domains),protein_existence]) writer.writerows(nextprot_file) - data_table_entry = dict(id=release_id, name = name, value = path) + id = str(10000000000 - int(time.strftime("%Y%m%d"))) + + data_table_entry = dict(id=id, release=release_id, name = name, value = path) _add_data_table_entry(data_manager_dict, data_table_entry, "proteore_nextprot_ref") ####################################################################################################### diff -r ebdd4961c6c2 -r 6cbb76823b7b data_manager/resource_building.xml --- a/data_manager/resource_building.xml Thu May 09 05:28:22 2019 -0400 +++ b/data_manager/resource_building.xml Fri May 10 04:22:00 2019 -0400 @@ -1,4 +1,4 @@ - + to create or update reference files for proteore tools diff -r ebdd4961c6c2 -r 6cbb76823b7b data_manager_conf.xml --- a/data_manager_conf.xml Thu May 09 05:28:22 2019 -0400 +++ b/data_manager_conf.xml Fri May 10 04:22:00 2019 -0400 @@ -140,6 +140,7 @@ + diff -r ebdd4961c6c2 -r 6cbb76823b7b tool-data/proteore_nextprot_ref.loc.sample --- a/tool-data/proteore_nextprot_ref.loc.sample Thu May 09 05:28:22 2019 -0400 +++ b/tool-data/proteore_nextprot_ref.loc.sample Fri May 10 04:22:00 2019 -0400 @@ -1,2 +1,2 @@ -# -#nextprot_ref_09-03-2019 neXtProt release 09-03-2019 tool-data/nextprot_ref_09-03-2019.tsv +# +#9979809691 nextprot_ref_09-03-2019 neXtProt release 09-03-2019 tool-data/nextprot_ref_09-03-2019.tsv diff -r ebdd4961c6c2 -r 6cbb76823b7b tool_data_table_conf.xml.sample --- a/tool_data_table_conf.xml.sample Thu May 09 05:28:22 2019 -0400 +++ b/tool_data_table_conf.xml.sample Fri May 10 04:22:00 2019 -0400 @@ -37,7 +37,7 @@ - id, name, value + id, release, name, value