# HG changeset patch # User proteore # Date 1591687346 0 # Node ID 149eb9e80717f1522140662c34e65c3dc4b03462 # Parent bd67848a789face4f891c95ef0aca0f9ca2d0e5d "planemo upload commit 625bba907f87307a7c954e1fa73438dd3b12fe34-dirty" diff -r bd67848a789f -r 149eb9e80717 data_manager/resource_building.py --- a/data_manager/resource_building.py Tue Jun 09 06:59:35 2020 +0000 +++ b/data_manager/resource_building.py Tue Jun 09 07:22:26 2020 +0000 @@ -569,8 +569,6 @@ time.sleep(3600) resp = requests.get(url=query) data = resp.json() - resp = requests.get(url=query) - data = resp.json() #get info from json dictionary mass_mol = data["entry"]["isoforms"][0]["massAsString"] diff -r bd67848a789f -r 149eb9e80717 data_manager/resource_building.xml --- a/data_manager/resource_building.xml Tue Jun 09 06:59:35 2020 +0000 +++ b/data_manager/resource_building.xml Tue Jun 09 07:22:26 2020 +0000 @@ -1,4 +1,4 @@ - + to create or update reference files for proteore tools @@ -15,7 +15,7 @@ #else if $database.database == "peptide_atlas" --peptideatlas="$database.tissues" --date="$database.date" - #else if $database.database == "id_mapping" + #else if $database.database == "id_mapping"1 --id_mapping="$database.species" #else if $database.database == "PPI" --interactome="$database.base.interactome"