Mercurial > repos > proteore > proteore_data_manager

comparison data_manager/resource_building.py @ 64:570519e1d968 draft

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"planemo upload commit 503b62802cab9c4a1e7d71643378b117842146eb-dirty"
author proteore
date Thu, 30 Jul 2020 13:06:57 +0000
parents 54089754ba12
children 64b2d53be08b
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63:54089754ba12 64:570519e1d968
563 for id in ids : 563 for id in ids :
564 query="https://api.nextprot.org/entry/"+id+".json" 564 query="https://api.nextprot.org/entry/"+id+".json"
565 try: 565 try:
566 resp = requests.get(url=query) 566 resp = requests.get(url=query)
567 except : 567 except :
568 print ("waiting 10 minutes before trying again") 568 print ("waiting 15 minutes before trying again")
569 time.sleep(600) 569 time.sleep(900)
570 resp = requests.get(url=query) 570 resp = requests.get(url=query)
571 data = resp.json() 571 data = resp.json()
572 572
573 #get info from json dictionary 573 #get info from json dictionary
574 mass_mol = data["entry"]["isoforms"][0]["massAsString"] 574 mass_mol = data["entry"]["isoforms"][0]["massAsString"]