Mercurial > repos > proteore > proteore_clusterprofiler

changeset 6:2b14f4f8e128 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload commit e36653304aba2af0dab3d8aedf1f593a06e45efd-dirty
author proteore
date Tue, 18 Sep 2018 08:28:16 -0400
parents 36c586c918eb
children b25f272d3505
files GO-enrich.R cluster_profiler.xml
diffstat 2 files changed, 2 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/GO-enrich.R	Tue Sep 18 08:25:17 2018 -0400
+++ b/GO-enrich.R	Tue Sep 18 08:28:16 2018 -0400
@@ -65,6 +65,7 @@
                 universe=universe,
                 OrgDb=orgdb,
                 ont=ontology,
+                keytype="ENTREZID",
                 pAdjustMethod="BH",
                 pvalueCutoff=pval_cutoff,
                 qvalueCutoff=qval_cutoff,
--- a/cluster_profiler.xml	Tue Sep 18 08:25:17 2018 -0400
+++ b/cluster_profiler.xml	Tue Sep 18 08:28:16 2018 -0400
@@ -1,4 +1,4 @@
-<tool id="cluter_profiler" name="clusterProfiler" version="2018.09.18">
+<tool id="cluter_profiler" name="clusterProfiler" version="2018.09.18.2">
     <description>
     GO terms classification and enrichment analysis
     </description>