Mercurial > repos > proteore > proteore_clusterprofiler
comparison cluster_profiler.xml @ 12:7a5814f0392a draft
planemo upload commit 3305e0bef3621ca618b08e9f2fa79e55ecd11595-dirty
| author | proteore |
|---|---|
| date | Tue, 25 Sep 2018 08:20:45 -0400 |
| parents | 37370cab5e5f |
| children | 1d6095094e5f |
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| 11:37370cab5e5f | 12:7a5814f0392a |
|---|---|
| 1 <tool id="cluter_profiler" name="clusterProfiler" version="2018.09.25"> | 1 <tool id="cluter_profiler" name="clusterProfiler" version="2018.09.25.2"> |
| 2 <description> | 2 <description> |
| 3 GO terms classification and enrichment analysis | 3 GO terms classification and enrichment analysis |
| 4 </description> | 4 </description> |
| 5 <requirements> | 5 <requirements> |
| 6 <requirement type="package" version="3.4.1">R</requirement> | 6 <requirement type="package" version="3.4.1">R</requirement> |
| 7 <requirement type="package" version="3.5.0">bioconductor-org.hs.eg.db</requirement> | 7 <requirement type="package" version="3.5.0">bioconductor-org.hs.eg.db</requirement> |
| 8 <requirement type="package" version="3.5.0">bioconductor-org.mm.eg.db</requirement> | 8 <requirement type="package" version="3.5.0">bioconductor-org.mm.eg.db</requirement> |
| 9 <requirement type="package" version="3.5.0">bioconductor-org.Rn.eg.db</requirement> | 9 <requirement type="package" version="3.5.0">bioconductor-org.rn.eg.db</requirement> |
| 10 <requirement type="package" version="3.2.0">bioconductor-dose</requirement> | 10 <requirement type="package" version="3.4.0">bioconductor-dose</requirement> |
| 11 <requirement type="package" version="3.4.4">bioconductor-clusterprofiler</requirement> | 11 <requirement type="package" version="3.4.4">bioconductor-clusterprofiler</requirement> |
| 12 </requirements> | 12 </requirements> |
| 13 <command detect_errors="exit_code"><![CDATA[ | 13 <command detect_errors="exit_code"><![CDATA[ |
| 14 Rscript "$__tool_directory__/GO-enrich.R" | 14 Rscript "$__tool_directory__/GO-enrich.R" |
| 15 #if $input.ids == "text" | 15 #if $input.ids == "text" |