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comparison weeder2_wrapper.xml @ 1:79f075dc6cfb draft default tip

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Uploaded version 2.0.3.
author pjbriggs
date Wed, 26 Sep 2018 06:39:27 -0400
parents fb7e680232af
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0:fb7e680232af 1:79f075dc6cfb
1 <tool id="motiffinding_weeder2" name="Weeder2" version="2.0.2"> 1 <tool id="motiffinding_weeder2" name="Weeder2" version="2.0.3">
2 <description>Motif discovery in sequences from coregulated genes of a single species</description> 2 <description>Motif discovery in sequences from coregulated genes of a single species</description>
3 <macros>
4 <import>weeder2_macros.xml</import>
5 </macros>
6 <requirements> 3 <requirements>
7 <requirement type="package" version="2.0">weeder</requirement> 4 <requirement type="package" version="2.0">weeder</requirement>
8 </requirements> 5 </requirements>
9 <command><![CDATA[ 6 <command detect_errors="exit_code"><![CDATA[
10 @CONDA_WEEDER2_FREQFILES_PATH@ &&
11 bash $__tool_directory__/weeder2_wrapper.sh 7 bash $__tool_directory__/weeder2_wrapper.sh
12 $sequence_file $species_code ${species_code.fields.path} 8 $sequence_file $species_code ${species_code.fields.path}
13 $output_motifs_file $output_matrix_file 9 $output_motifs_file $output_matrix_file
14 $strands 10 $strands
15 #if $chipseq.use_chipseq 11 #if $chipseq.use_chipseq