Mercurial > repos > pjbriggs > rnachipintegrator

annotate data_manager_conf.xml @ 5:f10961b74494 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Version 1.1.0.0.
author pjbriggs
date Tue, 07 Aug 2018 06:19:23 -0400
parents 0abe6bac47a6
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
pjbriggs
parents:
diff changeset
1 <?xml version="1.0"?>
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
pjbriggs
parents:
diff changeset
2 <data_managers>
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
pjbriggs
parents:
diff changeset
3 <data_manager tool_file="data_manager/data_manager_rnachipintegrator_fetch_canonical_genes.xml" id="data_manager_rnachipintegrator_fetch_canonical_genes">
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
pjbriggs
parents:
diff changeset
4 <data_table name="rnachipintegrator_canonical_genes">
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
pjbriggs
parents:
diff changeset
5 <output>
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
pjbriggs
parents:
diff changeset
6 <column name="value" />
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
pjbriggs
parents:
diff changeset
7 <column name="dbkey" />
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
pjbriggs
parents:
diff changeset
8 <column name="name" />
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
pjbriggs
parents:
diff changeset
9 <column name="path" output_ref="out_file" >
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
pjbriggs
parents:
diff changeset
10 <move type="file">
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
pjbriggs
parents:
diff changeset
11 <source>${path}</source>
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
pjbriggs
parents:
diff changeset
12 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">rnachipintegrator/${dbkey}/${path}</target>
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
pjbriggs
parents:
diff changeset
13 </move>
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
pjbriggs
parents:
diff changeset
14 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/rnachipintegrator/${dbkey}/${path}</value_translation>
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
pjbriggs
parents:
diff changeset
15 <value_translation type="function">abspath</value_translation>
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
pjbriggs
parents:
diff changeset
16 </column>
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
pjbriggs
parents:
diff changeset
17 </output>
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
pjbriggs
parents:
diff changeset
18 </data_table>
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
pjbriggs
parents:
diff changeset
19 </data_manager>
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
pjbriggs
parents:
diff changeset
20 </data_managers>