Mercurial > repos > pjbriggs > rnachipintegrator

annotate tool-data/rnachipintegrator_canonical_genes.loc.sample @ 5:f10961b74494 draft default tip

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Version 1.1.0.0.
author pjbriggs
date Tue, 07 Aug 2018 06:19:23 -0400
parents 0abe6bac47a6
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Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
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1 #This is a sample file distributed with Galaxy that is used by the
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
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2 #rnachipintegrator_canonical_genes tool. The file has this format (white space
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
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3 #characters are TAB characters):
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
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4 #
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
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5 #<UniqueID> <Build> <Description> <PathToGeneListFile>
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
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6 #
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
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7 #For example:
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
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8 #
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
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9 #hg18_Gm12878_Ctcf hg18 Gm12878/Ctcf /genomes/hg18/Gm12878_Ctcf.tsv
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
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10 #hg19_Gm12878_H3k27ac hg19 Gm12878/H3k27ac /genomes/hg19/Gm12878_H3k27ac.tsv
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
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11 #mm9_Gm12878_H3k27me3 mm9 Gm12878/H3k27me3 /genomes/mm9/Gm12878_H3k27me3.tsv
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
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12 #...etc...
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
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13 #
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
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14 #The gene list files should contain the gene symbol, chromosome, start and end
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
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15 #positions, and strand for each gene in the list.
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
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16 #
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
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17 #This file should be placed in galaxy's tool-data directory when the
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
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18 #rnachipintegrator_canonical_genes tool is installed.
0abe6bac47a6 planemo upload for repository https://github.com/fls-bioinformatics-core/galaxy-tools/tree/master/rnachipintegrator commit 97d556dae96db5457590a3a257392b6e4093a912-dirty
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