Mercurial > repos > pjbriggs > pal_finder

view test-data/illuminaPE_assembly.out @ 14:3f8bf1a0403b draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded version with bad primer ranger detection (WIP).
author pjbriggs
date Thu, 22 Mar 2018 07:21:26 -0400
parents c6d5ddf728c3
children
line wrap: on
line source

readPairID	Forward Primer	F Primer Position in Assembled Read	Reverse Primer	R Primer Position in Assembled Read	Motifs(bases)	Assembled Read ID	Assembled Read Sequence	Raw Forward Read ID	Raw Forward Read Sequence	Raw Reverse Read ID	Raw Reverse Read Sequence
ILLUMINA-545855:49:FC61RLR:2:1:19063:1614		1		1	AT(14) AT(14) AT(14) AT(14) 	>ILLUMINA-545855:49:FC61RLR:2:1:19063:1614	TATATATATATATACACATATATATATATATTTTTTACATTATTTCACTTCGCCCAAACTAGAGAGTCTAACAAAGTACAACCCAGCATATTAAAGTTCATCTCAGTTTTGTTCTGAAATGAGAAAAAAATATATATATATATGTTTATATATATATATA	>ILLUMINA-545855:49:FC61RLR:2:1:19063:1614	TATATATATATATACACATATATATATATATTTTTTACATTATTTCACTTCGCCCAAACTAGAGAGTCTAACAAAGTACAACCCAGCATATTAAAGTTCATCTCAGTTTTGTTCTG	>ILLUMINA-545855:49:FC61RLR:2:1:19063:1614	TATATATATATATAAACATATATATATATATTTTTTTCTCATTTCAGAACAAAAGTGAGATGAACTTTAATATGGTGGGGTGTATTTTGAGAGACTCTCTAGTTTGGGAGGAGTGA