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comparison README.rst @ 9:b3ca3ece8a8b draft

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WIP detect/trap "bad primer product range" errors.
author pjbriggs
date Fri, 16 Jun 2017 09:12:09 -0400
parents 67ab365c29a7
children d26fb5260c67
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8:67ab365c29a7 9:b3ca3ece8a8b
59 59
60 ========== ====================================================================== 60 ========== ======================================================================
61 Version Changes 61 Version Changes
62 ---------- ---------------------------------------------------------------------- 62 ---------- ----------------------------------------------------------------------
63 63
64 0.02.04.6 - Trap for errors in ``pal_finder_v0.02.04.pl`` resulting in bad
65 ranges being supplied to ``primer3_core`` for some reads via
66 ``PRIMER_PRODUCT_RANGE_SIZE``.
64 0.02.04.5 - Update to handle large output files which can sometimes be generated 67 0.02.04.5 - Update to handle large output files which can sometimes be generated
65 by the ``pal_finder_v0.02.04.pl`` or ``pal_filter.py`` scripts (logs 68 by the ``pal_finder_v0.02.04.pl`` or ``pal_filter.py`` scripts (logs
66 of hundreds of Gb's have been observed in production): log files 69 of hundreds of Gb's have been observed in production): log files
67 longer than 500 lines are now truncated to avoid downstream problems. 70 longer than 500 lines are now truncated to avoid downstream problems.
68 0.02.04.4 - Update to the filter script (``pal_filter.py``) which removes some 71 0.02.04.4 - Update to the filter script (``pal_filter.py``) which removes some