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comparison README.rst @ 15:a3af1ff4cad1 draft

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pal_finder 0.02.04.7 for testing.
author pjbriggs
date Mon, 14 May 2018 11:10:19 -0400
parents 3f8bf1a0403b
children f7d63032217b
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14:3f8bf1a0403b 15:a3af1ff4cad1
61 Version Changes 61 Version Changes
62 ---------- ---------------------------------------------------------------------- 62 ---------- ----------------------------------------------------------------------
63 63
64 0.02.04.7 - Trap for errors in ``pal_finder_v0.02.04.pl`` resulting in bad 64 0.02.04.7 - Trap for errors in ``pal_finder_v0.02.04.pl`` resulting in bad
65 ranges being supplied to ``primer3_core`` for some reads via 65 ranges being supplied to ``primer3_core`` for some reads via
66 ``PRIMER_PRODUCT_RANGE_SIZE``. 66 ``PRIMER_PRODUCT_RANGE_SIZE`` (and enable 'bad' reads to be output
67 to a dataset); add new option to use a random subset of reads for
68 microsatellite detection.
67 0.02.04.6 - Update to get dependencies using ``conda`` when installed from the 69 0.02.04.6 - Update to get dependencies using ``conda`` when installed from the
68 toolshed (this removes the explicit dependency on Perl 5.16 70 toolshed (this removes the explicit dependency on Perl 5.16
69 introduced in 0.02.04.2, as a result the outputs from the tool are 71 introduced in 0.02.04.2, as a result the outputs from the tool are
70 now non-deterministic in some cases). 72 now non-deterministic in some cases).
71 0.02.04.5 - Update to handle large output files which can sometimes be generated 73 0.02.04.5 - Update to handle large output files which can sometimes be generated