Mercurial > repos > pjbriggs > pal_finder

annotate test-data/illuminaPE_r1_no_microsats.fq @ 18:f7d63032217b draft default tip

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Uploaded version 0.02.04.8 (improved fastq subsetting implementation)
author pjbriggs
date Tue, 03 Jul 2018 08:35:32 -0400
parents a3af1ff4cad1
children
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1 @ILLUMINA-545855:49:FC61RLR:2:1:10979:1695 1:N:0:TCCTGA
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2 TACTGTTTAGAATAGACTGTTCTCCCACTATATTTTGCATTGGTGCATACTCAGCTTTAGTAATAAGTGTGATTCTGGTAGAGAGAGAGAGAGATACCAACCTCTTCTTCCCACTA
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3 +
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4 IIIIIHIIIGHHIIDGHIIIIIIHIIIIIIIIIIIIHGIIIIHGIIIIHHHIHHGHIIHHEHHIGHGDHDHHHGGHEGAHGDGEHEGEGBGCEDBDDGEEFDEECGDEGDEDEDE8
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5 @ILLUMINA-545855:49:FC61RLR:2:1:19063:1614 1:N:0:TCCTGA
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6 TATATATATATATACACATATATATATATATTTTTTACATTATTTCACTTCGCCCAAACTAGAGAGTCTAACAAAGTACAACCCAGCATATTAAAGTTCATCTCAGTTTTGTTCTG
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7 +
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8 IIIIIIIGIEIIIIGIIIHHIHIGIGIIIIIHIIIIHGBEIIIIHIFHHIHFIIIIFHFIHIIHFF>EEEBDGDD;BD8DDBBDDBGHGHHHHEFE=DBCDEEEBEBEGHGAFH@E
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9 @ILLUMINA-545855:49:FC61RLR:2:1:1978:1220 1:N:0:TCCTGA
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10 TCATAAGAATGAGCAGTAAACAAAGGCAAAGGGGAGATAACACACACACACAAAATAAAAAAACATCAATTTCTAATACACGCCTTTATTATAAAGAAATAAATCACTGAAAAACA
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12 DDDDDBDBDDB7?BBB5BB>1?<?88>DDD?4(6367;>?2<164=;>8<0DDD>>A6A?>;;6>+6>><>4-8484888&@D@@DD<D;D>>?<9DD;6DDC<DD;<88@#####
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
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13 @ILLUMINA-545855:49:FC61RLR:2:1:5879:1238 1:N:0:TCCTGA
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14 TCCCCACCCTGTCATGGTTCTATGTTTTTGTTTTTGTTTTTGTTTTTATGGTTTCCGTATTCCACATTAAAACCTTATGTAACGTACGGGCCAATAAATAGTTACTCGCCATATCC
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16 ####################################################################################################################
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17 @ILLUMINA-545855:49:FC61RLR:2:1:6204:1090 1:N:0:TCCTGA
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18 TGCTTTGGTTCTAAGAGAAAAACAATTATTATAAATGTTTATAATTGATGATAAGCATTTTTGTACAAAGCCAAGACCATTCTGAATGAAGCACCCAAAAAGCCCGGAGGCAACAA
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20 ####################################################################################################################
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21 @ILLUMINA-545855:49:FC61RLR:2:1:8044:1926 1:N:0:TCCTGA
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22 TAGATTTTTTTTTTTATATATATATAAATATAGATGTACATATATTTATATAAATATAAAAGCACAGCATCCTCCTGTCTCTCCTCCTGATTTATTATGGTTAAAGCTTGTGACAG
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23 +
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24 HHHHHHHHHHHHHHHFHFGFHEFFDF92=@=>;;;=HHHGHHHHHHHHHHHHHHHHGHHHFHHHHFHFDHHHHHHHHHHHHHHHHGHHGGHHHHHHHHHHEHHHHGEHHHEFE>EB
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25 @ILLUMINA-545855:49:FC61RLR:2:1:8157:1636 1:N:0:TCCTGA
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26 TACTAGTCTAATAATTGCAGGCAGCTGAACTAGATAGGTCCTAAAGTACAGTGGGGAGGCTGGTGTGTGTGTGTGCATGGGATTGTCAGCCTTACCATCAGTCCTGATTTGTAGGT
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27 +
a3af1ff4cad1 pal_finder 0.02.04.7 for testing.
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28 HHHHHHHHHHHHHFHHHHHGHHHHHHGHHHHGHHHHHH>HHGGGGFFHHHHGHGHHFHHHHGGBGDCAC>CBDBDDCFGED@BDDB@BBBBECCD@<CC>C=?9==@CECB=BBB8
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29 @ILLUMINA-545855:49:FC61RLR:2:1:8899:1514 1:N:0:TCCTGA
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30 TCTTTATCTAAACACATCCTGAAATACCATCTGTTACACACACACACAGCAGTGGAAGTATAAAAAAAAATCTGGACATCTCAAAATAATTGCGTTTCTGAAGTGTTACATTTTTC
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31 +
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32 IIIIIHIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIGIIIIIGIIIIIIIIIIIIIIHHGIIIIHIHHHHIHHHHHHHGHHHHHGFHEHEHHHHHHHII>