Mercurial > repos > pjbriggs > pal_finder

annotate test-data/illuminaPE_assembly.out @ 18:f7d63032217b draft default tip

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Uploaded version 0.02.04.8 (improved fastq subsetting implementation)
author pjbriggs
date Tue, 03 Jul 2018 08:35:32 -0400
parents c6d5ddf728c3
children
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6
c6d5ddf728c3 Updated version of palfilter.py.
pjbriggs
parents: 5
diff changeset
1 readPairID Forward Primer F Primer Position in Assembled Read Reverse Primer R Primer Position in Assembled Read Motifs(bases) Assembled Read ID Assembled Read Sequence Raw Forward Read ID Raw Forward Read Sequence Raw Reverse Read ID Raw Reverse Read Sequence
5
ef95b26a2407 Uploaded 0.02.04.4.
pjbriggs
parents: 3
diff changeset
2 ILLUMINA-545855:49:FC61RLR:2:1:19063:1614 1 1 AT(14) AT(14) AT(14) AT(14) >ILLUMINA-545855:49:FC61RLR:2:1:19063:1614 TATATATATATATACACATATATATATATATTTTTTACATTATTTCACTTCGCCCAAACTAGAGAGTCTAACAAAGTACAACCCAGCATATTAAAGTTCATCTCAGTTTTGTTCTGAAATGAGAAAAAAATATATATATATATGTTTATATATATATATA >ILLUMINA-545855:49:FC61RLR:2:1:19063:1614 TATATATATATATACACATATATATATATATTTTTTACATTATTTCACTTCGCCCAAACTAGAGAGTCTAACAAAGTACAACCCAGCATATTAAAGTTCATCTCAGTTTTGTTCTG >ILLUMINA-545855:49:FC61RLR:2:1:19063:1614 TATATATATATATAAACATATATATATATATTTTTTTCTCATTTCAGAACAAAAGTGAGATGAACTTTAATATGGTGGGGTGTATTTTGAGAGACTCTCTAGTTTGGGAGGAGTGA