Mercurial > repos > pjbriggs > macs21

comparison tool_dependencies.xml @ 9:7aecd0908b3c draft

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Uploaded version 2.1.0-4.
author pjbriggs
date Mon, 15 Jun 2015 06:06:48 -0400
parents 0c6b14f3fefc
children 2d4ef45ec089
comparison
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8:78c15c0a96ae 9:7aecd0908b3c
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <!-- Dependencies from main/test toolsheds --> 3 <!-- Dependencies from main/test toolsheds -->
4 <package name="numpy" version="1.9"> 4 <package name="numpy" version="1.9">
5 <repository changeset_revision="266529386609" name="package_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 5 <repository changeset_revision="43cb426cb05d" name="package_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
6 </package> 6 </package>
7 <package name="R" version="3.1.2"> 7 <package name="R" version="3.1.2">
8 <repository changeset_revision="41f43a2064ba" name="package_r_3_1_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 8 <repository changeset_revision="41f43a2064ba" name="package_r_3_1_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
9 </package> 9 </package>
10 <!-- Subset of UCSC tools --> 10 <!-- Subset of UCSC tools -->
43 <install version="1.0"> 43 <install version="1.0">
44 <actions> 44 <actions>
45 <action type="download_by_url">https://pypi.python.org/packages/source/M/MACS2/MACS2-2.1.0.20140616.tar.gz</action> 45 <action type="download_by_url">https://pypi.python.org/packages/source/M/MACS2/MACS2-2.1.0.20140616.tar.gz</action>
46 <!-- Install environment for main & test toolsheds --> 46 <!-- Install environment for main & test toolsheds -->
47 <action type="set_environment_for_install"> 47 <action type="set_environment_for_install">
48 <repository changeset_revision="266529386609" name="package_numpy_1_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 48 <repository changeset_revision="43cb426cb05d" name="package_numpy_1_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
49 <package name="numpy" version="1.9" /> 49 <package name="numpy" version="1.9" />
50 </repository> 50 </repository>
51 </action> 51 </action>
52 <action type="make_directory">$INSTALL_DIR/lib/python</action> 52 <action type="make_directory">$INSTALL_DIR/lib/python</action>
53 <action type="shell_command"> 53 <action type="shell_command">