Mercurial > repos > pjbriggs > data_manager_mothur_toolsuite
comparison tool-data/mothur_aligndb.loc.sample @ 0:b90e0f2bf4b1 draft default tip
Initial version.
| author | pjbriggs |
|---|---|
| date | Tue, 18 Nov 2014 09:57:33 -0500 |
| parents | |
| children |
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| -1:000000000000 | 0:b90e0f2bf4b1 |
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| 1 #This is a sample file distributed with Galaxy that enables tools | |
| 2 #to use a directory of metagenomics files. | |
| 3 #file has this format (white space characters are TAB characters): | |
| 4 # | |
| 5 # Reference Alignments: http://www.mothur.org/wiki/Alignment_database | |
| 6 # | |
| 7 #<dbname> <file_base> | |
| 8 # | |
| 9 #greengenes /project/db/galaxy/mothur/core_set_aligned.imputed.fasta | |
| 10 #silva archaea /project/db/galaxy/mothur/Silva.archaea/silva.archaea.fasta | |
| 11 #silva bacteria /project/db/galaxy/mothur/silva.bacteria/silva.bacteria.fasta | |
| 12 #silva eukarya /project/db/galaxy/mothur/silva.eukarya.fasta | |
| 13 #silva archaea nogap /project/db/galaxy/mothur/Silva.archaea/nogap.archaea.fasta | |
| 14 #silva bacteria nogap /project/db/galaxy/mothur/silva.bacteria/nogap.bacteria.fasta | |
| 15 #silva eukarya nogap /project/db/galaxy/mothur/nogap.eukarya.fasta | |
| 16 #FungiLSU_train_1400bp_8506_mod.fasta /project/db/galaxy/mothur/RDP/FungiLSU_train_1400bp_8506_mod.fasta | |
| 17 #trainset6_032010.rdp.fasta /project/db/galaxy/mothur/RDP/trainset6_032010.rdp.fasta | |
| 18 #trainset7_112011.pds.fasta /project/db/galaxy/mothur/RDP/trainset7_112011.pds.fasta | |
| 19 #trainset7_112011.rdp.fasta /project/db/galaxy/mothur/RDP/trainset7_112011.rdp.fasta |