Mercurial > repos > pjbriggs > ceas
diff README.markdown @ 3:82df5af2995f draft
Renamed from "ceasbw..." to "ceas...".
author | pjbriggs |
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date | Wed, 22 Apr 2015 05:34:06 -0400 |
parents | 8b25779ee261 |
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--- a/README.markdown Tue Apr 21 10:56:47 2015 -0400 +++ b/README.markdown Wed Apr 22 05:34:06 2015 -0400 @@ -1,18 +1,22 @@ -CEASbw -====== +CEAS +==== -XML and wrapper script for the Cistrome version of the CEAS package, which can be -used to annotate intervals and scores with genome features. +XML and wrapper script for the CEAS package, which can be used to annotate intervals +and scores with genome features. -In addition to the `ceas` program, the Cistrome version of the package includes the -`ceasBW` program which can handle +This tool uses the Cistrome version of the package, which provides two versions of +the `ceas` program: in addition to the `ceas` program (the same as that available +from the main CEAS website), it also includes the `ceasBW` program (which can handle +bigwig input). The tool assumes that the `ceas` and `ceasBW` programs are on the Galaxy user's -path. The official CEAS website is at +path. + +The official CEAS website is at: <http://liulab.dfci.harvard.edu/CEAS/index.html> -the Cistrome version can be found via +The Cistrome version can be found via <https://bitbucket.org/cistrome/cistrome-applications-harvard/overview>