Mercurial > repos > pjbriggs > ceas

comparison data_manager_conf.xml @ 4:4e2883bb058d draft

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Synchronise version with one on main toolshed (version of 30/06/2015)
author pjbriggs
date Wed, 10 Aug 2016 11:04:42 -0400
parents d9032bb158b9
children
comparison
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3:82df5af2995f 4:4e2883bb058d
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <data_managers> 2 <data_managers>
3 <data_manager tool_file="data_manager/data_manager_ceas_fetch_annotations.xml" id="ceas_fetch_annotations"> 3 <data_manager tool_file="data_manager/data_manager_ceas_fetch_annotations.xml" id="ceas_fetch_annotations">
4 <data_table name="ceas_annotations"> 4 <data_table name="ceas_annotations">
5 <output> 5 <output>
6 <!-- 6 <column name="value" />
7 <column name="value" />
8 -->
9 <column name="dbkey" /> 7 <column name="dbkey" />
10 <column name="name" /> 8 <column name="name" />
11 <column name="value" output_ref="out_file" > 9 <column name="path" output_ref="out_file" >
12 <move type="file"> 10 <move type="file">
13 <source>${value}</source> 11 <source>${path}</source>
14 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">ceas/${dbkey}/${value}</target> 12 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">ceas/${dbkey}/${path}</target>
15 </move> 13 </move>
16 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/ceas/${dbkey}/${value}</value_translation> 14 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/ceas/${dbkey}/${path}</value_translation>
17 <value_translation type="function">abspath</value_translation> 15 <value_translation type="function">abspath</value_translation>
18 </column> 16 </column>
19 </output> 17 </output>
20 </data_table> 18 </data_table>
21 </data_manager> 19 </data_manager>