Mercurial > repos > pjbriggs > amplicon_analysis_pipeline

diff tool_dependencies.xml @ 42:098ad1dd7760 draft

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planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 10be6f00106e853a6720e4052871d9d84e027137
author pjbriggs
date Thu, 05 Dec 2019 11:48:01 +0000
parents
children 496cc0ddce3d
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Thu Dec 05 11:48:01 2019 +0000
@@ -0,0 +1,16 @@
+<?xml version="1.0"?>
+<tool_dependency>
+  <package name="amplicon_analysis_pipeline" version="1.3.5">
+    <install version="1.0">
+      <actions>
+	<action type="download_file">https://raw.githubusercontent.com/pjbriggs/Amplicon_analysis-galaxy/update-to-Amplicon_analysis_pipeline-1.3/install_amplicon_analysis-1.3.5.sh</action>
+	<action type="shell_command">
+	  sh ./install_amplicon_analysis.sh $INSTALL_DIR
+	</action>
+	<action type="set_environment">
+	    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/Amplicon_analysis-1.3.5/bin</environment_variable>
+	</action>
+      </actions>
+    </install>
+  </package>
+</tool_dependency>