Mercurial > repos > pjbriggs > amplicon_analysis_pipeline
comparison tool_dependencies.xml @ 39:d19fca1c009c draft
planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit c3970ae16b02774148dbf950880f07255734a9a8-dirty
author | pjbriggs |
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date | Wed, 17 Oct 2018 08:14:27 -0400 |
parents | c9ed9443f293 |
children | 5ef333d1c303 |
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38:7b2c40450792 | 39:d19fca1c009c |
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1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
2 <tool_dependency> | 2 <tool_dependency> |
3 <package name="amplicon_analysis_pipeline-all" version="1.2.3"> | 3 <package name="amplicon_analysis_pipeline" version="1.2.3"> |
4 <install version="1.0"> | 4 <install version="1.0"> |
5 <actions> | 5 <actions> |
6 <action type="download_file">https://raw.githubusercontent.com/pjbriggs/Amplicon_analysis-galaxy/5fe08ecabf682265778d6307fa63a44c768d251c/install_amplicon_analysis.sh</action> | 6 <action type="download_file">https://raw.githubusercontent.com/pjbriggs/Amplicon_analysis-galaxy/master/amplicon_analysis_pipeline.py</action> |
7 <action type="shell_command"> | 7 <action type="shell_command"> |
8 sh ./install_amplicon_analysis.sh $INSTALL_DIR | 8 sh ./install_amplicon_analysis.sh $INSTALL_DIR |
9 </action> | 9 </action> |
10 <action type="set_environment"> | 10 <action type="set_environment"> |
11 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/Amplicon_analysis-1.2.3/bin</environment_variable> | 11 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/Amplicon_analysis-1.2.3/bin</environment_variable> |