comparison tool_dependencies.xml @ 39:d19fca1c009c draft

planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit c3970ae16b02774148dbf950880f07255734a9a8-dirty
author pjbriggs
date Wed, 17 Oct 2018 08:14:27 -0400
parents c9ed9443f293
children 5ef333d1c303
comparison
equal deleted inserted replaced
38:7b2c40450792 39:d19fca1c009c
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="amplicon_analysis_pipeline-all" version="1.2.3"> 3 <package name="amplicon_analysis_pipeline" version="1.2.3">
4 <install version="1.0"> 4 <install version="1.0">
5 <actions> 5 <actions>
6 <action type="download_file">https://raw.githubusercontent.com/pjbriggs/Amplicon_analysis-galaxy/5fe08ecabf682265778d6307fa63a44c768d251c/install_amplicon_analysis.sh</action> 6 <action type="download_file">https://raw.githubusercontent.com/pjbriggs/Amplicon_analysis-galaxy/master/amplicon_analysis_pipeline.py</action>
7 <action type="shell_command"> 7 <action type="shell_command">
8 sh ./install_amplicon_analysis.sh $INSTALL_DIR 8 sh ./install_amplicon_analysis.sh $INSTALL_DIR
9 </action> 9 </action>
10 <action type="set_environment"> 10 <action type="set_environment">
11 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/Amplicon_analysis-1.2.3/bin</environment_variable> 11 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/Amplicon_analysis-1.2.3/bin</environment_variable>