Mercurial > repos > pjbriggs > amplicon_analysis_pipeline

comparison tool_dependencies.xml @ 51:5cbc70d1c2af draft

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planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit d84c32edb10649e0be9109108d85b0055ae11185
author pjbriggs
date Thu, 19 Dec 2019 11:47:06 +0000
parents dac038bd896d
children 6c15d2223e46
comparison
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50:dac038bd896d 51:5cbc70d1c2af
6 <action type="download_file">https://raw.githubusercontent.com/pjbriggs/Amplicon_analysis-galaxy/update-to-Amplicon_analysis_pipeline-1.3/install_amplicon_analysis-1.3.6.sh</action> 6 <action type="download_file">https://raw.githubusercontent.com/pjbriggs/Amplicon_analysis-galaxy/update-to-Amplicon_analysis_pipeline-1.3/install_amplicon_analysis-1.3.6.sh</action>
7 <action type="shell_command"> 7 <action type="shell_command">
8 sh ./install_amplicon_analysis-1.3.6.sh $INSTALL_DIR 8 sh ./install_amplicon_analysis-1.3.6.sh $INSTALL_DIR
9 </action> 9 </action>
10 <action type="set_environment"> 10 <action type="set_environment">
11 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/Amplicon_analysis-1.3.5/bin</environment_variable> 11 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/Amplicon_analysis-1.3.6/bin</environment_variable>
12 </action> 12 </action>
13 </actions> 13 </actions>
14 </install> 14 </install>
15 </package> 15 </package>
16 </tool_dependency> 16 </tool_dependency>